Automated analysis of blood vessel morphology using angiographic optical coherence tomography
In collaboration with Aarhus University Hospital, this project automates OCTA-based vascular analysis to support skin disease diagnostics using a custom, multi-step MATLAB workflow.
Deep Learning-assisted 3D Segmentation for Monitoring Cartilage Regeneration in Knee MRI Scans
This collaborative project with Aarhus University Hospital supports a clinical trial investigating the regenerative effects of stem cell injections for treating knee osteoarthritis. An AI-assisted tool is being developed to enable accurate 3D segmentation of cartilage and surrounding bone in MRI scans, facilitating the quantification of structural changes over time.
Quantification of Microglia Morphology from whole Piglet Brain Brightfield Images
This project investigates how gut inflammation affects brain health by analyzing changes in microglia structure in piglet hippocampus tissue using a custom QuPath–ImageJ pipeline.